Issues

• Non-Deterministic results PreProcess.reduce(extend=True) due to internal MCMC sampling

  GeomScale/dingo#136 · Filter by author PalashMendhe opened on Mar 6, 2026
  2

• Dingo always selects HiGHS as first choice of optimizer

  GeomScale/dingo#134 · Filter by author quothbonney opened on Feb 25, 2026
  1

• Add short note about selecting correct Python kernel for tutorial notebooks

  GeomScale/dingo#130 · Filter by author saksham242007 opened on Jan 30, 2026

• Feature: Standardized benchmark suite to measure Python interface (dingo) overhead vs C++ (volesti)

  GeomScale/dingo#127 · Filter by author saksham-stack opened on Jan 25, 2026
  1

• poetry install fails on Apple M-series (numpy pin, volesti build errors)

  GeomScale/dingo#124 · Filter by author Mohit-Lakra opened on Jan 8, 2026

• Inconsistencies between build.py and setup.py results in different build instructions for different OS

  GeomScale/dingo#121 · Filter by author adot-7 opened on Dec 9, 2025
  11

• Tutorial is outdated

  GeomScale/dingo#107 · Filter by author KeShih opened on Aug 30, 2024
  9

• Error using fva after sampling

  GeomScale/dingo#96 · Filter by author vfisikop opened on Apr 4, 2024
  6

• Redundant methods in MetabolicNetwork

  GeomScale/dingo#95 · Filter by author vfisikop opened on Apr 3, 2024
  3

• Refactor mmcs algorithm

  GeomScale/dingo#93 · Filter by author vfisikop opened on Mar 28, 2024
  1

• loopless sampling

  enhancement
  GeomScale/dingo#86 · Filter by author hariszaf opened on Feb 14, 2024
  2

• generate_steady_states fails when you edit a model's optimal percentage twice

  GeomScale/dingo#83 · Filter by author hariszaf opened on Dec 11, 2023
  1

• Consider a docker image

  enhancement
  GeomScale/dingo#78 · Filter by author hariszaf opened on Sep 14, 2023
  1

• rounding.py is excluded from github actions

  tests
  GeomScale/dingo#72 · Filter by author TolisChal opened on Aug 5, 2023
  5

• Sampling on the flux space of multiple metabolic networks

  enhancement
  GeomScale/dingo#67 · Filter by author vissarion opened on Jun 23, 2023
  2

• non-uniqueness issue in dynamic FBA

  enhancement
  GeomScale/dingo#66 · Filter by author hariszaf opened on Jun 8, 2023
  1

• Add volume computation support and motivation

  enhancement
  GeomScale/dingo#64 · Filter by author vissarion opened on May 5, 2023
  

• segmentation fault when ESS low

  bug
  GeomScale/dingo#47 · Filter by author hariszaf opened on Sep 26, 2022
  2

• include volume approximation

  enhancement
  GeomScale/dingo#44 · Filter by author Patrickens opened on Sep 6, 2022
  1

• sampling using the maximum entropy probability distribution

  enhancement
  GeomScale/dingo#34 · Filter by author hariszaf opened on Feb 21, 2022
  2

• code coverage for dingo

  Hacktoberfesttests
  GeomScale/dingo#32 · Filter by author vissarion opened on Oct 7, 2021