Issues

• --unmapped_reads_output writes uncompressed .fastq file

  LadnerLab/PepSIRF#268 · Filter by author ekelley903 opened on Aug 18, 2026

• Deconv segmentation fault

  LadnerLab/PepSIRF#267 · Filter by author SeanGolez opened on May 8, 2025

• Demux: output non-unique peptides after truncation

  LadnerLab/PepSIRF#258 · Filter by author SeanGolez opened on Nov 21, 2024
  1

  

• Create C++ version of link_patternedKmers.py with parallelization

  LadnerLab/PepSIRF#245 · Filter by author SeanGolez opened on Jun 24, 2024
  1

  

• Pepsirf Test does not consistently build on all systems

  demux
  LadnerLab/PepSIRF#181 · Filter by author Clockwork-Rat opened on Nov 5, 2022

• Non-multiplexed Reference Assignment

  demuxenhancementlow priority
  LadnerLab/PepSIRF#23 · Filter by author ZwFink opened on Jan 31, 2020
  1