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Merged
domfournier merged 3 commits into from
Sep 22, 2026
Merged

GEOPY-196: geoh5py mesh object origin should return a list #93

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ff551b2
[GEOPY-196] Refactor
domfournier Sep 21, 2026
f391faf
[GEOPY-196] Re-lock on latest
domfournier Sep 22, 2026
e0da7df
[GEOPY-196] Fix test
domfournier Sep 22, 2026
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114 changes: 58 additions & 56 deletions environments/py-3.12-linux-64-dev.conda.lock.yml
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -6,7 +6,7 @@ channels:
- conda-forge
- nodefaults
dependencies:
- _openmp_mutex=4.5=7_kmp_llvm
- _openmp_mutex=4.5=8_kmp_llvm
- alabaster=1.0.0=pyhd8ed1ab_1
- annotated-types=0.8.0=pyhd8ed1ab_0
- astroid=4.0.4=py312h7900ff3_0
Expand All @@ -20,112 +20,114 @@ dependencies:
- aws-c-sdkutils=0.2.7=h01ee8f8_3
- aws-checksums=0.2.10=h01ee8f8_5
- babel=2.18.0=pyhcf101f3_1
- backports.zstd=1.7.0=py312h3f22e6b_0
- brotli=1.2.0=h505cf86_3
- brotli-bin=1.2.0=h9908984_3
- brotli-python=1.2.0=py312he9c40d5_3
- backports.zstd=1.7.0=py312h3f22e6b_1
- brotli=1.2.0=h505cf86_4
- brotli-bin=1.2.0=h9908984_4
- brotli-python=1.2.0=py312he9c40d5_4
- bzip2=1.0.8=hda65f42_10
- c-ares=1.34.8=hebe6cf0_2
- ca-certificates=2026.7.22=hbd8a1cb_0
- cached-property=1.5.2=hd8ed1ab_2
- cached_property=1.5.2=pyha770c72_2
- cached-property=2.0.1=pyhcf101f3_0
- cached_property=2.0.1=pyhcf101f3_0
- certifi=2026.7.22=pyhd8ed1ab_0
- charset-normalizer=3.5.1=pyhd8ed1ab_0
- colorama=0.4.6=pyhd8ed1ab_1
- contourpy=1.3.3=py312h0a2e395_4
- coverage=7.15.4=py312h589e9ff_1
- contourpy=1.4.0=py312h9be0db6_1
- coverage=7.16.1=py312h8b7ec3f_0
- cycler=0.12.1=pyhcf101f3_2
- dill=0.4.1=pyhcf101f3_0
- discretize=0.12.0=np2py312h2a48985_1
- docutils=0.22.4=pyhd8ed1ab_0
- exceptiongroup=1.3.1=pyhd8ed1ab_0
- fonttools=4.63.0=py312h8a5da7c_0
- fonttools=4.65.0=py312hfd18d64_0
- freetype=2.14.3=ha770c72_2
- h2=4.4.1=pyhcf101f3_0
- h5py=3.16.0=nompi_py312h7082e50_104
- hdf5=2.2.0=nompi_hc529623_100
- hpack=4.2.0=pyhd8ed1ab_0
- hyperframe=6.1.0=pyhd8ed1ab_0
- icu=78.3=py310h44b86e0_2
- idna=3.19=pyhcf101f3_0
- imagesize=2.0.0=pyhd8ed1ab_0
- importlib-metadata=9.0.0=pyhcf101f3_0
- idna=3.20=pyh5ded981_0
- imagesize=2.0.1=pyhd8ed1ab_0
- importlib-metadata=9.0.1=pyhcf101f3_0
- iniconfig=2.3.0=pyhd8ed1ab_0
- isort=8.0.1=pyhd8ed1ab_0
- isort=9.0.1=pyhd8ed1ab_0
- jinja2=3.1.6=pyhcf101f3_1
- keyutils=1.6.3=h7cc23a3_1
- kiwisolver=1.5.0=py312h0a2e395_0
- kiwisolver=1.5.1=py312h9be0db6_3
- krb5=1.22.2=hbc21106_2
- lcms2=2.19.1=h0c24ade_1
- lcms2=2.19.1=h9073bf1_3
- ld_impl_linux-64=2.46.1=default_hbd61a6d_102
- lerc=4.2.0=hdb68285_0
- libaec=1.1.5=h088129d_0
- libblas=3.11.0=9_h5875eb1_mkl
- libbrotlicommon=1.2.0=h39a168f_3
- libbrotlidec=1.2.0=ha411449_3
- libbrotlienc=1.2.0=h018ffa1_3
- libcblas=3.11.0=9_hfef963f_mkl
- libcurl=8.21.0=ha042cf0_5
- libblas=3.11.0=11_h5875eb1_mkl
- libbrotlicommon=1.2.0=h39a168f_4
- libbrotlidec=1.2.0=ha411449_4
- libbrotlienc=1.2.0=h018ffa1_4
- libcblas=3.11.0=11_hfef963f_mkl
- libcurl=8.22.0=ha042cf0_0
- libdeflate=1.25=hd45a770_1
- libedit=3.1.20250104=pl5321h373387f_1
- libev=4.33=h280c20c_3
- libexpat=2.8.1=hecca717_1
- libffi=3.7.0=h3435931_0
- libexpat=2.8.4=hd2095e1_0
- libffi=3.7.0=h81df57d_1
- libfreetype=2.14.3=ha770c72_2
- libfreetype6=2.14.3=h5e6c136_2
- libgcc=16.1.0=ha9f2e26_3
- libgcc-ng=16.1.0=h69a702a_3
- libgfortran=16.1.0=h69a702a_3
- libgfortran5=16.1.0=h79bb938_3
- libgcc=16.2.0=ha9f2e26_5
- libgcc-ng=16.2.0=h69a702a_5
- libgfortran=16.2.0=h69a702a_5
- libgfortran5=16.2.0=h6b99dfc_5
- libhwloc=2.13.0=default_he001693_1000
- libiconv=1.18=h0cb94f2_3
- libjpeg-turbo=3.2.0=hb03c661_1
- liblapack=3.11.0=9_h5e43f62_mkl
- liblapack=3.11.0=11_h5e43f62_mkl
- liblzma=5.8.3=hb03c661_1
- libnghttp2=1.68.1=h74cf4be_1
- libnsl=2.0.1=hb9d3cd8_1
- libpng=1.6.58=h922cc85_1
- libpsl=0.23.1=hd9e3e90_1
- libpython=3.12.14=h0c77377_3_cpython
- libsqlite=3.53.4=h13e7031_1
- libssh2=1.11.1=h6154650_1
- libstdcxx=16.1.0=h934c35e_3
- libstdcxx-ng=16.1.0=hdf11a46_3
- libtiff=4.7.2=h9d88235_0
- libuuid=2.42.2=h5347b49_0
- libstdcxx=16.2.0=h934c35e_5
- libstdcxx-ng=16.2.0=hdf11a46_5
- libtiff=4.7.2=hcc2c06a_1
- libuuid=2.42.3=hcfc3c73_0
- libwebp-base=1.6.0=hd42ef1d_1
- libxcb=1.17.0=hb83e432_1
- libxcb=1.17.0=hb83e432_2
- libxcrypt=4.4.38=h280c20c_0
- libxml2=2.15.3=h49c6c72_1
- libxml2-16=2.15.3=hca6bf5a_1
- libxml2=2.15.4=h7df9aa5_0
- libxml2-16=2.15.4=hf3af7cc_0
- libzlib=1.3.2=h25fd6f3_3
- llvm-openmp=22.1.8=h3206bd6_1
- llvm-openmp=23.1.1=h7148c6a_0
- markupsafe=3.0.3=py312h8a5da7c_1
- matplotlib-base=3.10.9=py312he3d6523_0
- mccabe=0.7.0=pyhd8ed1ab_1
- mkl=2026.1.0=hecca717_244
- mkl=2026.1.0=hd2095e1_245
- munkres=1.1.4=pyhd8ed1ab_1
- mypy_extensions=1.1.0=pyha770c72_0
- ncurses=6.6=hdb14827_1
- numpy=2.4.6=py312h33ff503_0
- openjpeg=2.5.4=h55fea9a_0
- openssl=3.6.3=h35e630c_1
- openjpeg=2.5.4=heb1ab33_2
- openssl=3.6.4=h781a0a9_0
- packaging=26.3=pyhc364b38_0
- pillow=12.3.0=py312h50c33e8_0
- pillow=12.3.0=py312h38079b3_4
- pip=26.2.1=pyh8b19718_0
- platformdirs=4.11.3=pyhcf101f3_0
- platformdirs=4.11.11=pyh5ded981_0
- pluggy=1.6.0=pyhf9edf01_1
- psutil=7.2.2=py312h1b36aeb_1
- pthread-stubs=0.4=hb03c661_1003
- psutil=7.2.2=py312h1b36aeb_3
- pthread-stubs=0.4=h7cc23a3_1004
- pydantic=2.12.5=pyhcf101f3_1
- pydantic-core=2.41.5=py312h868fb18_1
- pygments=2.21.0=pyhcf101f3_0
- pylint=4.0.7=pyhcf101f3_0
- pyparsing=3.3.2=pyhcf101f3_0
- pylint=4.0.8=pyhcf101f3_0
- pyparsing=3.3.3=pyh5ded981_0
- pysocks=1.7.1=pyha55dd90_7
- pytest=9.1.1=pyhc364b38_2
- pytest-cov=7.1.0=pyhcf101f3_0
- python=3.12.14=h8ab3286_0_cpython
- python=3.12.14=h5f976f7_3_cpython
- python-dateutil=2.9.0.post0=pyhe01879c_2
- python_abi=3.12=8_cp312
- python_abi=3.12=9_cp312
- pyyaml=6.0.3=py312h8a5da7c_1
- qhull=2020.2=h434a139_5
- readline=8.3=hd6e31c0_1
Expand All @@ -137,7 +139,7 @@ dependencies:
- six=1.17.0=pyhe01879c_1
- snowballstemmer=3.1.1=pyhd8ed1ab_0
- sphinx=9.1.0=pyhd8ed1ab_0
- sphinx-autodoc-typehints=3.13.2=pyhd8ed1ab_0
- sphinx-autodoc-typehints=3.13.7=pyhc364b38_0
- sphinx-rtd-theme=3.1.0=h9eada29_2
- sphinx_rtd_theme=3.1.0=pyhcf101f3_2
- sphinxcontrib-applehelp=2.0.0=pyhd8ed1ab_1
Expand All @@ -147,26 +149,26 @@ dependencies:
- sphinxcontrib-jsmath=1.0.1=pyhd8ed1ab_1
- sphinxcontrib-qthelp=2.0.0=pyhd8ed1ab_1
- sphinxcontrib-serializinghtml=2.0.0=pyhd8ed1ab_0
- tbb=2023.0.0=hab88423_2
- tbb=2023.1.0=hfd44327_0
- tk=8.6.13=noxft_h1df4ec4_4
- tomli=2.4.1=pyhcf101f3_0
- tomlkit=0.15.1=pyhcf101f3_0
- typing-extensions=4.16.0=h69aa097_0
- typing-inspection=0.4.4=pyhcf101f3_0
- typing_extensions=4.16.0=pyhcf101f3_0
- tzdata=2026c=h151e31d_0
- unicodedata2=17.0.1=py312h4c3975b_0
- urllib3=2.7.0=pyhd8ed1ab_0
- unicodedata2=18.0.0=py312h5cc1888_0
- urllib3=2.8.0=pyhd8ed1ab_0
- wheel=0.48.0=pyhd8ed1ab_0
- xorg-libxau=1.0.12=hb03c661_2
- xorg-libxdmcp=1.1.5=hb03c661_2
- xorg-libxau=1.0.12=h7cc23a3_2
- xorg-libxdmcp=1.1.5=h7cc23a3_2
- yaml=0.2.5=hebe6cf0_3
- zipp=4.1.0=pyhcf101f3_0
- zlib-ng=2.3.3=hce19668_1
- zstd=1.5.7=hb78ec9c_7
- pip:
- geoapps-utils @ git+https://github.com/MiraGeoscience/geoapps-utils.git@2e758b9671671160c76d182b72ae18ee735bd214
- geoh5py @ git+https://github.com/MiraGeoscience/geoh5py.git@6c850c89972154a08c2ee39ad2dd62e8d9c3afef
- geoapps-utils @ git+https://github.com/MiraGeoscience/geoapps-utils.git@a8101df536eec74db4cee740709f27396206fdcb
- geoh5py @ git+https://github.com/MiraGeoscience/geoh5py.git@856ad776e1d7eb6ee9b9a92e46a9ce7940e09651

variables:
KMP_WARNINGS: 0
91 changes: 46 additions & 45 deletions environments/py-3.12-linux-64.conda.lock.yml
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -6,7 +6,7 @@ channels:
- conda-forge
- nodefaults
dependencies:
- _openmp_mutex=4.5=7_kmp_llvm
- _openmp_mutex=4.5=8_kmp_llvm
- annotated-types=0.8.0=pyhd8ed1ab_0
- aws-c-auth=0.10.4=h4610da3_2
- aws-c-cal=0.9.15=h6bbde05_1
Expand All @@ -17,106 +17,107 @@ dependencies:
- aws-c-s3=0.13.1=h7508075_1
- aws-c-sdkutils=0.2.7=h01ee8f8_3
- aws-checksums=0.2.10=h01ee8f8_5
- brotli=1.2.0=h505cf86_3
- brotli-bin=1.2.0=h9908984_3
- brotli=1.2.0=h505cf86_4
- brotli-bin=1.2.0=h9908984_4
- bzip2=1.0.8=hda65f42_10
- c-ares=1.34.8=hebe6cf0_2
- ca-certificates=2026.7.22=hbd8a1cb_0
- cached-property=1.5.2=hd8ed1ab_2
- cached_property=1.5.2=pyha770c72_2
- contourpy=1.3.3=py312h0a2e395_4
- cached-property=2.0.1=pyhcf101f3_0
- cached_property=2.0.1=pyhcf101f3_0
- contourpy=1.4.0=py312h9be0db6_1
- cycler=0.12.1=pyhcf101f3_2
- discretize=0.12.0=np2py312h2a48985_1
- fonttools=4.63.0=py312h8a5da7c_0
- fonttools=4.65.0=py312hfd18d64_0
- freetype=2.14.3=ha770c72_2
- h5py=3.16.0=nompi_py312h7082e50_104
- hdf5=2.2.0=nompi_hc529623_100
- icu=78.3=py310h44b86e0_2
- keyutils=1.6.3=h7cc23a3_1
- kiwisolver=1.5.0=py312h0a2e395_0
- kiwisolver=1.5.1=py312h9be0db6_3
- krb5=1.22.2=hbc21106_2
- lcms2=2.19.1=h0c24ade_1
- lcms2=2.19.1=h9073bf1_3
- ld_impl_linux-64=2.46.1=default_hbd61a6d_102
- lerc=4.2.0=hdb68285_0
- libaec=1.1.5=h088129d_0
- libblas=3.11.0=9_h5875eb1_mkl
- libbrotlicommon=1.2.0=h39a168f_3
- libbrotlidec=1.2.0=ha411449_3
- libbrotlienc=1.2.0=h018ffa1_3
- libcblas=3.11.0=9_hfef963f_mkl
- libcurl=8.21.0=ha042cf0_5
- libblas=3.11.0=11_h5875eb1_mkl
- libbrotlicommon=1.2.0=h39a168f_4
- libbrotlidec=1.2.0=ha411449_4
- libbrotlienc=1.2.0=h018ffa1_4
- libcblas=3.11.0=11_hfef963f_mkl
- libcurl=8.22.0=ha042cf0_0
- libdeflate=1.25=hd45a770_1
- libedit=3.1.20250104=pl5321h373387f_1
- libev=4.33=h280c20c_3
- libexpat=2.8.1=hecca717_1
- libffi=3.7.0=h3435931_0
- libexpat=2.8.4=hd2095e1_0
- libffi=3.7.0=h81df57d_1
- libfreetype=2.14.3=ha770c72_2
- libfreetype6=2.14.3=h5e6c136_2
- libgcc=16.1.0=ha9f2e26_3
- libgcc-ng=16.1.0=h69a702a_3
- libgfortran=16.1.0=h69a702a_3
- libgfortran5=16.1.0=h79bb938_3
- libgcc=16.2.0=ha9f2e26_5
- libgcc-ng=16.2.0=h69a702a_5
- libgfortran=16.2.0=h69a702a_5
- libgfortran5=16.2.0=h6b99dfc_5
- libhwloc=2.13.0=default_he001693_1000
- libiconv=1.18=h0cb94f2_3
- libjpeg-turbo=3.2.0=hb03c661_1
- liblapack=3.11.0=9_h5e43f62_mkl
- liblapack=3.11.0=11_h5e43f62_mkl
- liblzma=5.8.3=hb03c661_1
- libnghttp2=1.68.1=h74cf4be_1
- libnsl=2.0.1=hb9d3cd8_1
- libpng=1.6.58=h922cc85_1
- libpsl=0.23.1=hd9e3e90_1
- libpython=3.12.14=h0c77377_3_cpython
- libsqlite=3.53.4=h13e7031_1
- libssh2=1.11.1=h6154650_1
- libstdcxx=16.1.0=h934c35e_3
- libstdcxx-ng=16.1.0=hdf11a46_3
- libtiff=4.7.2=h9d88235_0
- libuuid=2.42.2=h5347b49_0
- libstdcxx=16.2.0=h934c35e_5
- libstdcxx-ng=16.2.0=hdf11a46_5
- libtiff=4.7.2=hcc2c06a_1
- libuuid=2.42.3=hcfc3c73_0
- libwebp-base=1.6.0=hd42ef1d_1
- libxcb=1.17.0=hb83e432_1
- libxcb=1.17.0=hb83e432_2
- libxcrypt=4.4.38=h280c20c_0
- libxml2=2.15.3=h49c6c72_1
- libxml2-16=2.15.3=hca6bf5a_1
- libxml2=2.15.4=h7df9aa5_0
- libxml2-16=2.15.4=hf3af7cc_0
- libzlib=1.3.2=h25fd6f3_3
- llvm-openmp=22.1.8=h3206bd6_1
- llvm-openmp=23.1.1=h7148c6a_0
- matplotlib-base=3.10.9=py312he3d6523_0
- mkl=2026.1.0=hecca717_244
- mkl=2026.1.0=hd2095e1_245
- munkres=1.1.4=pyhd8ed1ab_1
- ncurses=6.6=hdb14827_1
- numpy=2.4.6=py312h33ff503_0
- openjpeg=2.5.4=h55fea9a_0
- openssl=3.6.3=h35e630c_1
- openjpeg=2.5.4=heb1ab33_2
- openssl=3.6.4=h781a0a9_0
- packaging=26.3=pyhc364b38_0
- pillow=12.3.0=py312h50c33e8_0
- pillow=12.3.0=py312h38079b3_4
- pip=26.2.1=pyh8b19718_0
- psutil=7.2.2=py312h1b36aeb_1
- pthread-stubs=0.4=hb03c661_1003
- psutil=7.2.2=py312h1b36aeb_3
- pthread-stubs=0.4=h7cc23a3_1004
- pydantic=2.12.5=pyhcf101f3_1
- pydantic-core=2.41.5=py312h868fb18_1
- pyparsing=3.3.2=pyhcf101f3_0
- python=3.12.14=h8ab3286_0_cpython
- pyparsing=3.3.3=pyh5ded981_0
- python=3.12.14=h5f976f7_3_cpython
- python-dateutil=2.9.0.post0=pyhe01879c_2
- python_abi=3.12=8_cp312
- python_abi=3.12=9_cp312
- qhull=2020.2=h434a139_5
- readline=8.3=hd6e31c0_1
- s2n=1.7.6=h7e3ee7f_0
- scipy=1.17.1=py312h54fa4ab_1
- setuptools=84.0.0=pyh332efcf_0
- six=1.17.0=pyhe01879c_1
- tbb=2023.0.0=hab88423_2
- tbb=2023.1.0=hfd44327_0
- tk=8.6.13=noxft_h1df4ec4_4
- typing-extensions=4.16.0=h69aa097_0
- typing-inspection=0.4.4=pyhcf101f3_0
- typing_extensions=4.16.0=pyhcf101f3_0
- tzdata=2026c=h151e31d_0
- unicodedata2=17.0.1=py312h4c3975b_0
- unicodedata2=18.0.0=py312h5cc1888_0
- wheel=0.48.0=pyhd8ed1ab_0
- xorg-libxau=1.0.12=hb03c661_2
- xorg-libxdmcp=1.1.5=hb03c661_2
- xorg-libxau=1.0.12=h7cc23a3_2
- xorg-libxdmcp=1.1.5=h7cc23a3_2
- zlib-ng=2.3.3=hce19668_1
- zstd=1.5.7=hb78ec9c_7
- pip:
- geoapps-utils @ git+https://github.com/MiraGeoscience/geoapps-utils.git@2e758b9671671160c76d182b72ae18ee735bd214
- geoh5py @ git+https://github.com/MiraGeoscience/geoh5py.git@6c850c89972154a08c2ee39ad2dd62e8d9c3afef
- geoapps-utils @ git+https://github.com/MiraGeoscience/geoapps-utils.git@a8101df536eec74db4cee740709f27396206fdcb
- geoh5py @ git+https://github.com/MiraGeoscience/geoh5py.git@856ad776e1d7eb6ee9b9a92e46a9ce7940e09651

variables:
KMP_WARNINGS: 0
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