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Add check_boresch_search() to validate the ligand before a search trajectory - #490

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lohedges merged 1 commit into
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fix_somd2_222
Sep 28, 2026
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lohedges merged 1 commit into
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fix_somd2_222

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@lohedges lohedges commented Sep 28, 2026 •

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This PR adds a helper function for OpenBioSim/somd2#222 that checks that input is compatible with the chosen ABFE restraint search protocol. This can be used as an early check in SOMD2 when performing automated restraint searches, allowing the Aldeghi protocol to be used as a fallback in cases where the RXRX protocol isn't valid, i.e. the ligand not having H-bond donors.

  • I confirm that I have merged the latest version of devel into this branch before issuing this pull request (e.g. by running git pull origin devel): [y]
  • I confirm that I have added a changelog entry to the changelog (we will add a link to this PR as part of the review): [y]
  • I confirm that I have permission to release this code under the GPL3 license: [y]

@lohedges lohedges added the bug Something isn't working label Sep 28, 2026
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lohedges merged commit 91e3e96 into devel Sep 28, 2026
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lohedges deleted the fix_somd2_222 branch September 28, 2026 10:05
martin-wat-cresset pushed a commit to cresset-group/sire that referenced this pull request Sep 30, 2026

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sire-build — 37c02e94 Deployed Sep 28, 2026 by lohedges via build (3.12, windows) #444
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