Issues

• Small refactor APE.write workflows method

  Workflomics/ape#158 · Filter by author vedran-kasalica opened on Sep 8, 2026
  

• Update Java to next LTE version (21)

  java
  Workflomics/ape#154 · Filter by author eladrion opened on Feb 10, 2026

• [FEATURE] Add execution guarantee option for Shell scripts and Snakemake

  enhancement
  Workflomics/ape#153 · Filter by author eladrion opened on Feb 10, 2026

• Generalize codebase to support more domains

  enhancement
  Feature

  Workflomics/ape#140 · Filter by author eladrion opened on Nov 20, 2025
  4

  

• Enable Domain Caching to Speed Up Solving

  enhancement
  Workflomics/ape#128 · Filter by author vedran-kasalica opened on Sep 23, 2025

• The generated CWLs should use biotoolsID

  enhancement
  Workflomics/ape#118 · Filter by author vedran-kasalica opened on Sep 25, 2024
  1

  

• [FEATURE] Update constraint templates not to require parameters always

  enhancement
  Workflomics/ape#116 · Filter by author vedran-kasalica opened on Aug 15, 2024
  

• Error "format_2196" and "data_0916" not belonging to "format_1915" and "data_0006" respectively

  documentationfaq
  Workflomics/ape#115 · Filter by author almanilsson opened on Jun 4, 2024
  1

  

• Check SLTLx formulas earlier

  enhancement
  Workflomics/ape#66 · Filter by author KoenHav opened on Jul 6, 2022

• Add I/O types as relevant types

  enhancement
  Workflomics/ape#5 · Filter by author vedran-kasalica opened on Feb 19, 2020
  2

  

• Bug in parallel execution

  bug
  Workflomics/ape#4 · Filter by author vedran-kasalica opened on Feb 7, 2020
  7