Issues

• Grid plots of paths of sequences

  enhancement
  fedarko/wotplot#25 · Filter by author fedarko opened on Oct 8, 2026 · mgsc

• Allow lowercase nucleotides

  enhancement
  fedarko/wotplot#24 · Filter by author fedarko opened on Oct 8, 2026 · mgsc

• Avoid storing input sequences as DotPlotMatrix attributes

  backburnerenhancementpaper
  fedarko/wotplot#23 · Filter by author fedarko opened on Apr 30, 2025

• Investigate performance with big k-mer sizes (e.g. 5,001)

  adminbackburnerdocumentation
  fedarko/wotplot#22 · Filter by author fedarko opened on Apr 1, 2025

• Support RNA sequences

  enhancementpaper
  fedarko/wotplot#21 · Filter by author fedarko opened on Feb 10, 2025

• Make nbcmap color formats consistent between viz_imshow() and viz_spy()

  backburnerenhancement
  fedarko/wotplot#20 · Filter by author fedarko opened on Jan 19, 2025

• Add fancy length abbreviations to visualization default axis labels

  backburnerenhancement
  fedarko/wotplot#18 · Filter by author fedarko opened on Oct 29, 2024

• Add an interface for just getting the matching k-mer coordinates between two sequences

  enhancement
  fedarko/wotplot#15 · Filter by author fedarko opened on Dec 5, 2023

• Support protein sequences

  enhancementpaper
  fedarko/wotplot#13 · Filter by author fedarko opened on Oct 3, 2023

• Support degenerate / gap characters

  enhancement
  fedarko/wotplot#12 · Filter by author fedarko opened on Oct 2, 2023

• Add tick / grid convenience options to visualization functions

  enhancement
  fedarko/wotplot#10 · Filter by author fedarko opened on Sep 3, 2023

• Put on bioconda eventually?

  admin
  fedarko/wotplot#9 · Filter by author fedarko opened on Sep 2, 2023 · mgsc

• Add ResourceWarnings for certain pathological situations

  enhancement
  fedarko/wotplot#8 · Filter by author fedarko opened on Sep 2, 2023

• Make matplotlib an optional dependency?

  backburnerenhancement
  fedarko/wotplot#3 · Filter by author fedarko opened on Aug 24, 2023

• Performance notes / ideas

  documentation
  fedarko/wotplot#2 · Filter by author fedarko opened on Jul 25, 2023