Issues

• Example dataset (Adult (age P56) male mouse brain hippocampus (HIP) snmC-seq2 data) missing

  lhqing/ALLCools#68 · Filter by author wangmeijiao opened on Jun 17, 2026

• one_vs_rest_dmg confusion

  lhqing/ALLCools#67 · Filter by author Lucky777777777777 opened on Apr 20, 2026

• KeyError: 'dmr_motif_da' in scan_motifs

  lhqing/ALLCools#66 · Filter by author sarangchafle opened on May 8, 2025

• Error using call_dms

  lhqing/ALLCools#65 · Filter by author juychen opened on Apr 4, 2025

• allc_to_region_count() missing 1 required positional argument: 'cmeta_path'

  lhqing/ALLCools#57 · Filter by author rogadde opened on Sep 19, 2024
  5

• Replicated row in ALLC files

  lhqing/ALLCools#55 · Filter by author Ren-L-H opened on Aug 28, 2024

• installation error

  lhqing/ALLCools#46 · Filter by author timblosser opened on Sep 6, 2023

• Could provide some example file format?

  lhqing/ALLCools#44 · Filter by author ryuzheng opened on Aug 21, 2023
  3

• odd result from Lee et al. 2019 data

  lhqing/ALLCools#38 · Filter by author sshen82 opened on Apr 29, 2023

• checking expected strand merge behavior for CG-mC

  lhqing/ALLCools#35 · Filter by author chooliu opened on Mar 21, 2023