Issues

• Python 3.15 support

  sys-bio/roadrunner#1359 · Filter by author matthiaskoenig opened on Sep 23, 2026
  2

• Delayed event is never triggered when the output grid is coarser than the trigger window (case 01511)

  sys-bio/roadrunner#1358 · Filter by author matthiaskoenig opened on Sep 14, 2026

• Turn on using sparse matrices in CVODE

  sys-bio/roadrunner#1352 · Filter by author luciansmith opened on Sep 2, 2026

• Issue with stacked simulations and abs_tol

  sys-bio/roadrunner#1349 · Filter by author elbert5770 opened on Aug 26, 2026
  2

• There is no C API to get the number of assignment rules and their ids and types

  Quick Fix
  Feature

  sys-bio/roadrunner#1332 · Filter by author hsauro opened on Jun 18, 2026

• Python API has no getScaledElasticityIds() and getUnscaledElasticityIds()

  Quick Fix
  Feature

  sys-bio/roadrunner#1331 · Filter by author hsauro opened on Jun 18, 2026

• Nuisance warnings can't be suppressed in >=2.9.0

  sys-bio/roadrunner#1316 · Filter by author elbert5770 opened on May 1, 2026

• Allow setting absolute tolerance as vector-like things, not just list.

  sys-bio/roadrunner#1301 · Filter by author luciansmith opened on Dec 8, 2025

• Integrator state not updated after setValue when using oneStep with reset=False

  sys-bio/roadrunner#1300 · Filter by author matthiaskoenig opened on Nov 27, 2025
  14

• Issue installing LibRoadRunner

  sys-bio/roadrunner#1280 · Filter by author WilliamIX opened on Jul 14, 2025
  6

• Revive export C code

  sys-bio/roadrunner#1273 · Filter by author luciansmith opened on Jun 27, 2025

• Create conda install

  sys-bio/roadrunner#1264 · Filter by author luciansmith opened on Mar 6, 2025
  1

• Error: Segmentation fault (core dumped)

  sys-bio/roadrunner#1259 · Filter by author ZiyiiiLiu opened on Feb 28, 2025
  32

• changing species initialization order prevents steady state from being reached.

  sys-bio/roadrunner#1245 · Filter by author janisshin opened on Jan 26, 2025

• Change name of 'jacobian mode' flag

  sys-bio/roadrunner#1239 · Filter by author luciansmith opened on Dec 13, 2024

• The auto bifurcation diagram seems doesn't catch all multi-steady states?

  sys-bio/roadrunner#1235 · Filter by author ZiyiiiLiu opened on Sep 11, 2024

• can roadrunner make bifurcation diagram showing Hopf Bifurcation with oscillation showing?

  sys-bio/roadrunner#1234 · Filter by author ZiyiiiLiu opened on Sep 9, 2024
  2

• M1 issue with steadystate

  sys-bio/roadrunner#1226 · Filter by author luciansmith opened on Jun 18, 2024
  4

  

• Running into memory issues when simulating many models with with different initial conditions

  sys-bio/roadrunner#1225 · Filter by author dalbabur opened on May 31, 2024
  11

• Not possible to create many roadrunner instances

  sys-bio/roadrunner#1222 · Filter by author matthiaskoenig opened on May 17, 2024
  1

• Simulations with negative start times handle math with csymbol time incorrectly

  sys-bio/roadrunner#1211 · Filter by author matthiaskoenig opened on Apr 10, 2024
  3

• addX functions not wrapped well in Python

  sys-bio/roadrunner#1205 · Filter by author luciansmith opened on Mar 27, 2024

• Fix doc building so python-only functions make it to the docs

  documentation
  sys-bio/roadrunner#1197 · Filter by author luciansmith opened on Mar 14, 2024

• removeInitialAssignment results in many variables changing

  sys-bio/roadrunner#1195 · Filter by author dalbabur opened on Mar 11, 2024
  5

• Changing initial values should change SBML export

  sys-bio/roadrunner#1193 · Filter by author luciansmith opened on Mar 6, 2024
  1