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GEOPY-3100: Crash on active cells of DC2D inversion #492

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Merged
domfournier merged 15 commits into from
Oct 13, 2026
Merged

GEOPY-3100: Crash on active cells of DC2D inversion #492

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7756ef2
Interpolate distance by parts
domfournier Oct 9, 2026
9a876ab
Fix import
domfournier Oct 9, 2026
904c646
Fix selector of nearest part
domfournier Oct 9, 2026
c901772
Re-lock
domfournier Oct 10, 2026
e39db3c
Consolidate drape_locations comps.
domfournier Oct 10, 2026
5e9d80b
Re-adjust utils
domfournier Oct 10, 2026
ed3f2ed
Use matrix operations instead of loop
domfournier Oct 10, 2026
95ba956
Remove duplicated method
domfournier Oct 13, 2026
69a6d65
Fix tests
domfournier Oct 13, 2026
12d7107
Leave base_1d_driver abstract
domfournier Oct 13, 2026
54576ba
Fix tests agains
domfournier Oct 13, 2026
8a6e8fd
Re-lock
domfournier Oct 13, 2026
fc02439
Fix file_bytes accessor
domfournier Oct 13, 2026
30e9735
Adjust restart method and tests
domfournier Oct 13, 2026
7645523
Fix joint
domfournier Oct 13, 2026
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163 changes: 82 additions & 81 deletions environments/py-3.12-linux-64-dev.conda.lock.yml
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Expand Up @@ -15,21 +15,21 @@ dependencies:
- argon2-cffi-bindings=26.1.0=py312h5cc1888_2
- arrow=1.4.0=pyhcf101f3_0
- asciitree=0.3.3=py_2
- astroid=4.0.4=py312h7900ff3_0
- astroid=4.3.4=py312h20c3967_0
- asttokens=3.0.2=pyhd8ed1ab_0
- async-lru=2.3.0=pyhcf101f3_0
- async-lru=2.4.0=pyh5ded981_0
- attrs=26.1.0=pyhcf101f3_0
- aws-c-auth=0.10.4=h4610da3_2
- aws-c-cal=0.9.15=h6bbde05_1
- aws-c-common=0.14.3=hb03c661_0
- aws-c-compression=0.3.2=h01ee8f8_5
- aws-c-http=0.11.0=hbe094ff_5
- aws-c-io=0.27.5=h4f381ba_1
- aws-c-s3=0.13.1=h7508075_1
- aws-c-sdkutils=0.2.7=h01ee8f8_3
- aws-checksums=0.2.10=h01ee8f8_5
- aws-c-auth=1.0.0=h7648d90_2
- aws-c-cal=1.0.0=hcf7459e_1
- aws-c-common=1.0.3=hebe6cf0_0
- aws-c-compression=1.0.0=ha404f16_1
- aws-c-http=1.0.0=h392d1a3_1
- aws-c-io=1.0.0=h07ba609_0
- aws-c-s3=1.0.0=hfe03eda_1
- aws-c-sdkutils=1.0.0=ha404f16_1
- aws-checksums=1.0.1=ha404f16_0
- babel=2.18.0=pyhcf101f3_1
- backports.zstd=1.7.0=py312h3f22e6b_1
- backports.zstd=1.8.0=py312h3f22e6b_0
- beautifulsoup4=4.15.0=pyha770c72_0
- bleach=6.4.0=pyhcf101f3_0
- bleach-with-css=6.4.0=hac0b51c_0
Expand All @@ -44,138 +44,138 @@ dependencies:
- cached_property=2.0.1=pyhcf101f3_0
- certifi=2026.7.22=pyhd8ed1ab_0
- cffi=2.1.1=py312h703531f_3
- charset-normalizer=3.5.1=pyhd8ed1ab_0
- charset-normalizer=3.5.2=h1114479_0
- click=8.5.0=pyh5ded981_0
- cloudpickle=3.1.2=pyhcf101f3_1
- colorama=0.4.6=pyhd8ed1ab_1
- comm=0.2.3=pyhe01879c_0
- contourpy=1.4.0=py312h9be0db6_1
- coverage=7.16.1=py312h8b7ec3f_0
- cpython=3.12.14=py312hd8ed1ab_3
- coverage=7.16.2=py312h8b7ec3f_0
- cpython=3.12.15=py312hd8ed1ab_2
- cycler=0.12.1=pyhcf101f3_2
- cytoolz=1.1.0=py312h5cc1888_3
- cytoolz=1.2.0=py312h1b36aeb_0
- dask-core=2025.3.1=pyhd8ed1ab_0
- debugpy=1.8.22=py312h80505a6_0
- defusedxml=0.7.1=pyhd8ed1ab_0
- deprecated=1.3.1=pyhd8ed1ab_1
- deprecated=3.0.0=pyhc364b38_0
- dill=0.4.1=pyhcf101f3_0
- discretize=0.12.0=np2py312h2a48985_1
- distributed=2025.3.1=pyhd8ed1ab_0
- docutils=0.18.1=py312h7900ff3_2
- et_xmlfile=2.0.0=pyhd8ed1ab_1
- exceptiongroup=1.3.1=pyhd8ed1ab_0
- executing=2.2.1=pyhd8ed1ab_0
- executing=2.3.0=pyhd8ed1ab_0
- fasteners=0.20=pyhd8ed1ab_0
- fonttools=4.65.0=py312hfd18d64_0
- fqdn=1.5.1=pyhd8ed1ab_1
- fonttools=4.66.1=py312hfd18d64_0
- fqdn=1.6.0=pyh5ded981_0
- freetype=2.14.3=ha770c72_2
- fsspec=2026.7.0=pyhd8ed1ab_0
- fsspec=2026.9.0=pyhd8ed1ab_0
- geoana=0.8.1=np2py312h2a48985_0
- h11=0.16.0=pyhcf101f3_1
- h2=4.4.1=pyhcf101f3_0
- h5py=3.16.0=nompi_py312h7082e50_104
- hdf5=2.2.0=nompi_hc529623_100
- h5py=3.16.0=nompi_py312h7082e50_105
- hdf5=2.2.0=nompi_hdbb200c_101
- hpack=4.2.0=pyhd8ed1ab_0
- httpcore=1.0.9=pyh29332c3_0
- httpx=0.28.1=pyhd8ed1ab_0
- hyperframe=6.1.0=pyhd8ed1ab_0
- icu=75.1=he02047a_0
- icu=78.3=py310h44b86e0_2
- idna=3.20=pyh5ded981_0
- imagesize=2.0.1=pyhd8ed1ab_0
- importlib-metadata=9.0.1=pyhcf101f3_0
- iniconfig=2.3.0=pyhd8ed1ab_0
- ipykernel=7.3.0=pyha191276_0
- iniconfig=2.3.1=pyhd8ed1ab_0
- ipykernel=7.4.0=pyh4a3486f_0
- ipython=9.17.1=pyh53cf698_0
- ipython_genutils=0.2.0=pyhd8ed1ab_2
- ipython_pygments_lexers=1.1.1=pyhd8ed1ab_0
- ipywidgets=7.8.5=pyhd8ed1ab_0
- isoduration=20.11.0=pyhd8ed1ab_1
- isort=9.0.1=pyhd8ed1ab_0
- jedi=0.20.0=pyhcf101f3_0
- isort=9.0.2=pyhd8ed1ab_0
- jedi=0.20.1=pyh5ded981_0
- jinja2=3.1.6=pyhcf101f3_1
- joblib=1.6.0=pyhcf101f3_0
- json5=0.15.0=pyhd8ed1ab_0
- jsonpointer=3.1.1=pyhcf101f3_0
- json5=0.17.3=pyhd8ed1ab_0
- jsonpointer=3.2.1=pyh5ded981_0
- jsonschema=4.26.0=pyhcf101f3_1
- jsonschema-specifications=2025.9.1=pyhcf101f3_0
- jsonschema-with-format-nongpl=4.26.0=hcf101f3_1
- jupyter-book=2.1.6=pyhcf101f3_0
- jupyter-builder=1.2.3=pyh5ded981_0
- jupyter-book=2.1.7=pyh5ded981_0
- jupyter-lsp=2.3.1=pyhcf101f3_0
- jupyter_client=8.10.0=pyhcf101f3_0
- jupyter_core=5.9.1=pyhc90fa1f_0
- jupyter_events=0.12.1=pyhcf101f3_0
- jupyter_server=2.21.1=pyh5ded981_0
- jupyter_server_terminals=0.5.4=pyhcf101f3_0
- jupyterlab=4.6.4=pyhd8ed1ab_0
- jupyterlab=4.5.11=pyhd8ed1ab_0
- jupyterlab_pygments=0.3.0=pyhd8ed1ab_2
- jupyterlab_server=2.28.1=pyh5ded981_0
- jupyterlab_widgets=1.1.11=pyhd8ed1ab_0
- jupytext=1.19.5=pyh0398c0e_0
- jupytext=1.19.6=pyhb6928c1_1
- keyutils=1.6.3=h7cc23a3_1
- kiwisolver=1.5.1=py312h9be0db6_3
- krb5=1.22.2=hbc21106_2
- lark=1.3.1=pyhd8ed1ab_0
- lcms2=2.19.1=h9073bf1_3
- ld_impl_linux-64=2.46.1=default_hbd61a6d_102
- ld_impl_linux-64=2.46.1=default_hbd61a6d_103
- lerc=4.2.0=hdb68285_0
- libaec=1.1.5=h088129d_0
- libblas=3.11.0=6_h5875eb1_mkl
- libbrotlicommon=1.2.0=h39a168f_4
- libbrotlidec=1.2.0=ha411449_4
- libbrotlienc=1.2.0=h018ffa1_4
- libcblas=3.11.0=6_hfef963f_mkl
- libcurl=8.21.0=hcf29cc6_1
- libcurl=8.22.0=ha042cf0_0
- libdeflate=1.25=hd45a770_1
- libdlf=0.3.0=pyhd8ed1ab_1
- libedit=3.1.20250104=pl5321h373387f_1
- libedit=3.1.20260512=pl5321h373387f_0
- libev=4.33=h280c20c_3
- libexpat=2.8.4=hd2095e1_0
- libexpat=2.8.5=hd2095e1_0
- libffi=3.7.0=h81df57d_1
- libfreetype=2.14.3=ha770c72_2
- libfreetype6=2.14.3=h5e6c136_2
- libgcc=16.2.0=ha9f2e26_5
- libgcc-ng=16.2.0=h69a702a_5
- libgfortran=16.2.0=h69a702a_5
- libgfortran5=16.2.0=h6b99dfc_5
- libhwloc=2.13.0=default_he001693_1000
- libgcc=16.2.0=ha9f2e26_7
- libgcc-ng=16.2.0=h69a702a_7
- libgfortran=16.2.0=h69a702a_7
- libgfortran5=16.2.0=h6b99dfc_7
- libhwloc=2.15.0=default_hd7c4d0c_1001
- libiconv=1.18=h0cb94f2_3
- libjpeg-turbo=3.2.0=hb03c661_1
- liblapack=3.11.0=6_h5e43f62_mkl
- liblzma=5.8.3=hb03c661_1
- libnghttp2=1.68.1=h74cf4be_1
- libnsl=2.0.1=hb9d3cd8_1
- libpng=1.6.58=h922cc85_1
- libpython=3.12.14=h0c77377_3_cpython
- libpng=1.6.59=h922cc85_0
- libpsl=0.23.1=hd9e3e90_1
- libpython=3.12.15=ha57cdbe_2_cpython
- libscotch=7.0.11=int64_h807e49d_3
- libsodium=1.0.22=hebe6cf0_3
- libspatialindex=2.1.0=hee9eb32_2
- libsqlite=3.53.4=h0737f62_1
- libsqlite=3.54.0=h13e7031_1
- libssh2=1.11.1=h6154650_1
- libstdcxx=16.2.0=h934c35e_5
- libstdcxx-ng=16.2.0=hdf11a46_5
- libstdcxx=16.2.0=h934c35e_7
- libstdcxx-ng=16.2.0=hdf11a46_7
- libtiff=4.7.2=hcc2c06a_1
- libuuid=2.42.3=hcfc3c73_0
- libuuid=2.42.4=hcfc3c73_0
- libuv=1.52.1=h280c20c_1
- libwebp-base=1.6.0=hd42ef1d_1
- libxcb=1.17.0=hb83e432_2
- libxcrypt=4.4.38=h280c20c_0
- libxml2=2.15.1=h26afc86_0
- libxml2-16=2.15.1=ha9997c6_0
- libxml2=2.15.4=h7df9aa5_1
- libxml2-16=2.15.4=hf3af7cc_1
- libzlib=1.3.2=h25fd6f3_3
- llvm-openmp=23.1.1=h7148c6a_0
- llvm-openmp=23.1.3=h7148c6a_0
- locket=1.0.0=pyhd8ed1ab_0
- markdown-it-py=4.2.0=pyhd8ed1ab_0
- markupsafe=3.0.3=py312h8a5da7c_1
- markupsafe=3.0.4=py312h8b7ec3f_1
- matplotlib-base=3.10.9=py312he3d6523_0
- matplotlib-inline=0.2.2=pyhd8ed1ab_0
- mccabe=0.7.0=pyhd8ed1ab_1
- mdit-py-plugins=0.6.1=pyhd8ed1ab_0
- mdurl=0.1.2=pyhd8ed1ab_1
- metis=5.1.0=hd0bcaf9_1007
- metis=5.1.0=h86e3903_1008
- mistune=3.3.4=pyhcf101f3_0
- mkl=2025.3.1=h0e700b2_12
- msgpack-python=1.2.2=py312h9be0db6_2
- msgpack-python=1.2.3=py312h9be0db6_0
- mumps-include=5.8.2=h5a610fb_3
- mumps-seq=5.8.2=gfortran_hfb83c00_3
- munkres=1.1.4=pyhd8ed1ab_1
Expand All @@ -186,54 +186,55 @@ dependencies:
- nbconvert-pandoc=7.16.6=h7d6f222_1
- nbformat=5.11.1=pyhcf101f3_0
- ncurses=6.6=hdb14827_1
- nest-asyncio2=1.7.2=pyhcf101f3_0
- nodejs=22.6.0=hc19f0b3_1
- notebook=7.6.3=pyh5ded981_0
- nest-asyncio2=1.7.3=pyh5ded981_0
- nodejs=20.20.2=h4dda4d0_2
- notebook=7.5.8=pyh5ded981_0
- notebook-shim=0.2.4=pyhd8ed1ab_1
- numcodecs=0.15.1=py312hf79963d_1
- numpy=2.4.6=py312h33ff503_0
- onemkl-license=2025.3.1=hf2ce2f3_12
- openjpeg=2.5.4=heb1ab33_2
- openpyxl=3.1.5=py312hafd94c1_4
- openssl=3.6.4=h781a0a9_0
- openssl=3.6.5=h781a0a9_0
- overrides=7.7.0=pyhd8ed1ab_1
- packaging=26.3=pyhc364b38_0
- pandas=2.3.3=py312hf79963d_1
- pandoc=3.11=ha770c72_0
- pandocfilters=1.5.0=pyhd8ed1ab_0
- pandoc=3.12.1=ha770c72_0
- pandocfilters=1.5.1=pyh5ded981_0
- parso=0.8.7=pyhcf101f3_0
- partd=1.4.2=pyhd8ed1ab_0
- pexpect=4.9.0=pyhd8ed1ab_1
- pillow=12.3.0=py312h38079b3_4
- pip=26.2.1=pyh8b19718_0
- platformdirs=4.11.11=pyh5ded981_0
- platformdirs=4.13.0=pyh5ded981_0
- pluggy=1.6.0=pyhf9edf01_1
- prometheus_client=0.26.0=pyhd8ed1ab_0
- prompt-toolkit=3.0.53=pyha770c72_0
- psutil=7.2.2=py312h1b36aeb_3
- pthread-stubs=0.4=h7cc23a3_1004
- ptyprocess=0.7.0=pyhd8ed1ab_1
- pure_eval=0.2.4=pyhd8ed1ab_0
- pycparser=3.0=pyhcf101f3_0
- pycparser=3.11=pyh5ded981_0
- pydantic=2.12.5=pyhcf101f3_1
- pydantic-core=2.41.5=py312h868fb18_1
- pydiso=0.2.0=np2py312h1cfd70e_1
- pygments=2.21.0=pyhcf101f3_0
- pylint=4.0.8=pyhcf101f3_0
- pylint=4.1.3=pyh5ded981_0
- pymatsolver=0.3.1=pyh48887ae_201
- pyparsing=3.3.3=pyh5ded981_0
- pysocks=1.7.1=pyha55dd90_7
- pytest=9.1.1=pyhc364b38_2
- pytest-cov=7.1.0=pyhcf101f3_0
- python=3.12.14=h5f976f7_3_cpython
- python=3.12.15=h5f976f7_2_cpython
- python-abi3=3.12=he1d15d4_3
- python-dateutil=2.9.0.post0=pyhe01879c_2
- python-fastjsonschema=2.22.2=pyhcf101f3_0
- python-gil=3.12.14=hd8ed1ab_3
- python-gil=3.12.15=hd8ed1ab_2
- python-json-logger=4.2.0=pyhd8ed1ab_0
- python-mumps=0.0.6=nompi_hfa0b550
- python-tzdata=2026.3=pyhd8ed1ab_0
- python-tzdata=2026.5=pyh5ded981_0
- python_abi=3.12=9_cp312
- pytz=2026.3.post1=pyhcf101f3_0
- pytz=2026.5=pyh5ded981_0
- pyyaml=6.0.3=py312h8a5da7c_1
- pyzmq=27.2.0=py312h8a5ba0d_2
- qhull=2020.2=h434a139_5
Expand All @@ -244,9 +245,9 @@ dependencies:
- rfc3339-validator=0.1.4=pyhd8ed1ab_1
- rfc3986-validator=0.1.1=pyh9f0ad1d_0
- rfc3987-syntax=1.1.0=pyhe01879c_1
- rpds-py=2026.6.3=py312hc767a74_2
- rpds-py=2026.9.1=py312hc767a74_0
- rtree=1.4.1=pyh11ca60a_0
- s2n=1.7.6=h7e3ee7f_0
- s2n=1.7.7=ha5dc4ae_0
- scikit-learn=1.8.0=np2py312h3226591_1
- scipy=1.17.1=py312h54fa4ab_1
- send2trash=2.1.0=pyha191276_1
Expand All @@ -255,7 +256,7 @@ dependencies:
- sniffio=1.3.1=pyhd8ed1ab_2
- snowballstemmer=3.1.1=pyhd8ed1ab_0
- sortedcontainers=2.4.0=pyhd8ed1ab_1
- soupsieve=2.9.2=pyhd8ed1ab_0
- soupsieve=3.0.3=pyhd8ed1ab_0
- sphinx=5.3.0=pyhd8ed1ab_0
- sphinxcontrib-applehelp=2.0.0=pyhd8ed1ab_1
- sphinxcontrib-devhelp=2.0.0=pyhd8ed1ab_1
Expand All @@ -264,15 +265,15 @@ dependencies:
- sphinxcontrib-qthelp=2.0.0=pyhd8ed1ab_1
- sphinxcontrib-serializinghtml=2.0.0=pyhd8ed1ab_0
- stack_data=0.6.3=pyhd8ed1ab_1
- tbb=2023.1.0=hfd44327_0
- tbb=2023.1.0=haa8c3ee_2
- tblib=3.2.2=pyhcf101f3_0
- terminado=0.18.1=pyhc90fa1f_1
- threadpoolctl=3.7.0=pyhc455866_0
- tinycss2=1.4.0=pyhd8ed1ab_0
- tk=8.6.13=noxft_h1df4ec4_4
- tomli=2.4.1=pyhcf101f3_0
- tomli=2.5.0=pyh5ded981_0
- tomlkit=0.15.1=pyhcf101f3_0
- toolz=1.1.0=pyhd8ed1ab_1
- toolz=1.2.0=pyh5ded981_0
- tornado=6.5.10=py312h5cc1888_0
- tqdm=4.70.1=pyhfa0c392_0
- traitlets=5.16.1=pyhcf101f3_0
Expand All @@ -285,29 +286,29 @@ dependencies:
- unicodedata2=18.0.0=py312h5cc1888_0
- uri-template=1.3.0=pyhd8ed1ab_1
- urllib3=2.8.0=pyhd8ed1ab_0
- wcwidth=0.8.4=pyh5ded981_0
- wcwidth=0.9.2=py311hd139983_0
- webcolors=25.10.0=pyhd8ed1ab_0
- webencodings=0.5.1=pyhd8ed1ab_3
- websocket-client=1.9.2=pyh5ded981_1
- wheel=0.48.0=pyhd8ed1ab_0
- widgetsnbextension=3.6.10=pyhd8ed1ab_0
- wrapt=2.4.1=py312h1b36aeb_0
- wrapt=2.5.0=py312h1b36aeb_0
- xorg-libxau=1.0.12=h7cc23a3_2
- xorg-libxdmcp=1.1.5=h7cc23a3_2
- xyzservices=2026.9.1=pyhd8ed1ab_0
- yaml=0.2.5=hebe6cf0_3
- zarr=2.14.2=pyhd8ed1ab_0
- zeromq=4.3.5=h901266b_12
- zict=3.0.0=pyhd8ed1ab_1
- zipp=4.1.0=pyhcf101f3_0
- zipp=4.1.1=pyh5ded981_0
- zlib=1.3.2=h25fd6f3_3
- zlib-ng=2.3.3=hce19668_1
- zstd=1.5.7=hb78ec9c_7
- pip:
- geoapps-utils @ git+https://github.com/MiraGeoscience/geoapps-utils.git@a8101df536eec74db4cee740709f27396206fdcb
- geoh5py @ git+https://github.com/MiraGeoscience/geoh5py.git@856ad776e1d7eb6ee9b9a92e46a9ce7940e09651
- grid-apps @ git+https://github.com/MiraGeoscience/grid-apps.git@4d42970942d8f5254b56532e6bf041ff927125b1
- mira-simpeg @ git+https://github.com/MiraGeoscience/simpeg.git@ce3068d0b13190fb4384cd96410a7fb872f25394
- geoapps-utils @ git+https://github.com/MiraGeoscience/geoapps-utils.git@78fffb5b9f6de6bb152625fa04490060eae94630
- geoh5py @ git+https://github.com/MiraGeoscience/geoh5py.git@079824b3058f8197bdf17d9430a12b5ff035a489
- grid-apps @ git+https://github.com/MiraGeoscience/grid-apps.git@8c7c997201e215b3bf9752368ace0d4472e41b5c
- mira-simpeg @ git+https://github.com/MiraGeoscience/simpeg.git@51d08bb94fa3bc3e4c18ebf3850fe6bb4465202e

variables:
KMP_WARNINGS: 0
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