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Restore dense scholarly GitHub org profile source template - #119

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VatsalSy merged 1 commit into
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rayleigh-cloud/restore-dense-org-profile-77c4
Oct 1, 2026
Merged

Restore dense scholarly GitHub org profile source template#119
VatsalSy merged 1 commit into
mainfrom
rayleigh-cloud/restore-dense-org-profile-77c4

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@VatsalSy

@VatsalSy VatsalSy commented Oct 1, 2026 •
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Summary

Restores _org_profile/README.md to the dense scholarly layout from comphy-lab/.github@55ebba4 so the publications sync workflow no longer re-clobbers the elegant redesign with the old badge/OSS Insight wall.

On 2026-09-21 the sync bot copied the outdated badge-wall template wholesale into comphy-lab/.github/profile/README.md. The fix is the template itself — the workflow cp step is intentional and unchanged.

Changes

  • Replaced emoji/badge/widget _org_profile/README.md with the dense scholarly profile (research themes, curated featured-repos table, join/contact).
  • Preserved <!-- RECENT_PUBLICATIONS_START --> … <!-- RECENT_PUBLICATIONS_END --> markers and the current three recent publications matching comphy-lab.org/research.
  • Pointed People/Opportunities links at the live /team and /join paths (404s on /people and /opportunities).
  • Noted in README.md that _org_profile/README.md is the source of truth and must stay dense (sync copies it wholesale).

Not changed

  • .github/workflows/sync-org-profile-publications.yml cp behavior
  • scripts/sync_org_profile_publications.py marker-update logic

Test plan

  • Confirmed publications markers survive python3 scripts/sync_org_profile_publications.py
  • Confirmed no badge walls / OSS Insight / profile-view counters / emoji section headers
  • After merge, next sync should push this dense README to comphy-lab/.github/profile/README.md
Open in Web Open in Cursor 

Summary by CodeRabbit

  • Documentation
    • Updated the public lab profile with a concise overview, research themes, contact links, featured repositories and publication information.
    • Clarified that the profile is the source of truth and is copied to the public organisation profile during sync.

@cursoragent @VatsalSy
Restore dense scholarly GitHub org profile source template
5b5076a 
Replace the badge/OSS Insight widget wall in `_org_profile/README.md`
with the dense scholarly layout from comphy-lab/.github@55ebba4 so the
publications sync no longer re-clobbers the redesign. Keep publication
markers and the current three recent pubs; document that the template
is the wholesale source of truth for the org profile.

Co-authored-by: Vatsal Sanjay | CoMPhy Lab <vatsal.sanjay@comphy-lab.org>
@coderabbitai

coderabbitai Bot commented Oct 1, 2026 •
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Review in Change Stack →

Navigate logical layers of code changes, visualize relationships, and explore their blast radius.

🧰 Additional context used
📚 Code guidelines (1) 
AGENTS.md — auto-discovered

No actionable comments were generated in the recent review. 🎉

ℹ️ Recent review info
⚙️ Run configuration

Configuration used: Organization UI

Review profile: CHILL

Plan: Essentials

Run ID: dcae9ee0-11e7-4817-96ff-b6ea9465a123

📥 Commits

Reviewing files that changed from the base of the PR and between 93b2e20 and 5b5076a.

📒 Files selected for processing (2)
  • README.md
  • _org_profile/README.md

Included review availability: This review used your included allowance. 4 included reviews remain after this review. Your included PR review attempts over the past 7 days set your current allowance at 5 reviews per hour.

📜 Recent review details
🧰 Additional context used
📓 Path-based instructions (1)
Developer docs (READMEs, CONTRIBUTING) are not created unless asked.

📄 CodeRabbit inference engine (AGENTS.md)

Files:

  • README.md
🔇 Additional comments (2)
_org_profile/README.md (1)

3-3: LGTM!

Also applies to: 5-7, 9-16, 18-29, 41-47

README.md (1)

747-750: LGTM!

📝 Walkthrough

Walkthrough

The organisation profile was rewritten with a concise lab overview, research themes, featured repositories, publication content and contact links. The main README now identifies the profile source and states that the sync workflow copies it to the organisation profile.

Changes

Public organisation profile

Layer / File(s) Summary
Profile content and sync documentation
_org_profile/README.md, README.md		 The profile now presents the lab overview, research themes, six repositories, publications and contact links. The main README identifies _org_profile/README.md as the profile source, describes content constraints and records the sync destination.

Priority: ⬇️ Low

Estimated code review effort: 1 (Trivial) | ~5 minutes

Change: Other

Merge Risk: ⚪ Minimal · up to 5b507

The profile changes and documented sync sequence are consistent. No actionable merge-blocking risk is evident.

🚥 Pre-merge checks | ✅ 5
✅ Passed checks (5 passed)
Check name Status Explanation
Description Check ✅ Passed Check skipped - CodeRabbit’s high-level summary is enabled.
Title check ✅ Passed The title clearly describes the main change: restoring the scholarly GitHub organisation profile template.
Docstring Coverage ✅ Passed No functions found in the changed files to evaluate docstring coverage. Skipping docstring coverage check. Docstring coverage is scoped to functions touched by this diff. Analyzed 0 functions across 0…
Linked Issues check ✅ Passed Check skipped because no linked issues were found for this pull request.
Out of Scope Changes check ✅ Passed Check skipped because no linked issues were found for this pull request.
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@cursor
cursor Bot marked this pull request as ready for review October 1, 2026 08:12
Copilot AI balanced review requested due to automatic review settings October 1, 2026 08:12
@comphy-bot

comphy-bot commented Oct 1, 2026 •
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comphy-bot review status for comphy-lab/comphy-lab.github.io#119 at 5b5076a0: completed

Review completed for this exact pull request head.

@comphy-bot
comphy-bot self-requested a review October 1, 2026 08:14
Copilot AI reviewed Oct 1, 2026
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Copilot review overview

🟢 Approval recommended

The template, links, publication markers, and idempotent synchronization behavior were verified.

Review effort: Balanced
Findings: None

What changed in this PR

Restores the scholarly organization-profile template while preserving automated publication synchronization.

Changes:

  • Replaces badge-heavy content with concise research, repository, publication, and contact sections.
  • Corrects team and opportunities links.
  • Documents the profile template as the source of truth.
File Description
README.md Documents profile synchronization ownership.
_org_profile/​README.md Restores the dense scholarly profile layout.

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comphy-bot
comphy-bot approved these changes Oct 1, 2026
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Review: Restore dense scholarly GitHub org profile source template (#119)

Summary

+29/−242 across 2 files. This restores the dense scholarly org-profile template and records that the sync workflow copies that file wholesale. Publication markers and the three current papers remain intact. No P0/P1.

Findings

None.

Missing Tests

No code path changed. content-rules and build succeeded on this head. The publications-marker contract is still enforced by scripts/sync_org_profile_publications.py.

Verification Steps

  • _org_profile/README.md still contains RECENT_PUBLICATIONS_START / RECENT_PUBLICATIONS_END and the three current papers.
  • .github/workflows/sync-org-profile-publications.yml still copies _org_profile/README.md wholesale to profile/README.md in comphy-lab/.github.
  • https://comphy-lab.org/team and https://comphy-lab.org/join resolve; /people and /opportunities 404, matching the stated link correction.
  • Featured repository links resolve. The restored contact address matches the cited scholarly template.

@VatsalSy
VatsalSy merged commit 733fa83 into main Oct 1, 2026
6 checks passed
@VatsalSy
VatsalSy deleted the rayleigh-cloud/restore-dense-org-profile-77c4 branch October 1, 2026 10:55
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